rs32666187 SNP Detail

Summary

• ID
  rs32666187
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150228210 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGCAAAAC TGACTCTTGT
  GTGTTTCCCG TGGGCCTGGA GAGAACTCTG GCATCTACTT GGGATTGATG TTGTCTTCTT
  TCCCTACCCA GCCATGTCAT AAAGTGGGGG AACAGGCCAT TTGCGAAGAC ACACTGAGCG
  TGGATTATTA ACTGTAAGCG ATACTACTTT GTATAACCAA TAAAACAGAT ATGATCACTT
  S
  TCACCAAGAC ATAGCAGTTC TCTACGAGCA GAGGGTGGCT GCCCCGCCCC CCCCCGCCCC
  CACCCAGAGC AGGATCTGGC ATGGAAAGAC ACACAGACAC TCCCTGCTGA AGAAAGGGCT
  GGGGGAGAGC TGCAGAGCTG TGAAGTGTTG TGTGTAAAGT TGGGAGAGAC TCTGCGTGTC
  TGCAGTTACA TGGTGAGCAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46712121	NES11004605	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32666187					SNP	C	C	C	C	C	C	G	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46712121	NES11004605	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150228210 () rs orientation: forward

Symbol	Name	Function Class
Slc2a5	solute carrier family 2 (facilitated glucose transporter), member 5	within coordinates
Tssr40376	transcription start site region 40376	1465 bp downstream