rs32666485 SNP Detail

Summary

• ID
  rs32666485
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:91258784 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGAAGCCATC CAGCAATCTG
  TCTCCATCTG CATACCCAGA GTGCCAGATG AGAAAGATGA TATAGATTCT GGAGAGCTTT
  CTATCCTGCA CTCCAAAATG GAGACTCCAC GTCAGCTTCC ACCAAAAGAC CATCACCTAG
  CACAACATAT GAAACTTGAG GAATCTGGAC AAAAGGTTTT AGAAAAGGCT GCCTTCTAAC
  R
  CAACTAAACA GTATTTCAAA AAGGTTTCAC TTAGGGGAAT ACCCTACTGG CACTCAAGTC
  AATGGACTTT TTGCGTTAAG TTTTGACACT GGGCTACACT TTTTGTTTTT TGGTTTTTTT
  TAACAGAGTT ATTAAGGTTA AGAATAAAAT AGAAAGAAAA AGTGTTTTTT AAGGCCCTTT
  AGTCCTTTCA GAAGGTATTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45678105	mCV23976699	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss146983070	ENSMUSSNP3214443	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32666485					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:91258784 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14444	CpG island 14444	360 bp proximal
Elavl2	ELAV like RNA binding protein 1	within coordinates
Rr595258	regulatory region 595258	348 bp proximal
Rr595259	regulatory region 595259	1098 bp proximal
Rr595260	regulatory region 595260	1477 bp proximal
Tssr42416	transcription start site region 42416	1399 bp downstream
Tssr42417	transcription start site region 42417	1437 bp downstream
Tssr42418	transcription start site region 42418	1481 bp downstream