rs32667002 SNP Detail

Summary

• ID
  rs32667002
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150322516 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCCGTGAAC TGACTTAAGA TGCATTTAAG AAAACTTCCT
  GTTCGTTCTG GCCTAGGCAG TGTGGTTCCT TGGCTGACTC GCTTTCGGGA TAGACCACAG
  S
  TAGTCTGCTG ATTAGCCTGA CCGATAGGTC CACTTTTCTG CCCTTGGTCT GGCGTTCAAT
  CCAGATAAAG ACAGAGTGGG TGAGATTTTC TTCCTTTGGT                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	KK/HlJ	MOLF/EiJ
ss46712625	NES10999566	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	KK/HlJ	MOLF/EiJ
rs32667002					SNP	C	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46712625	NES10999566	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150322516 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15348	CpG island 15348	259 bp distal
Eno1	enolase 1, alpha non-neuron	within coordinates
Rr377416	regulatory region 377416	454 bp downstream
Rr605239	regulatory region 605239	1097 bp distal
Tssr40390	transcription start site region 40390	1292 bp downstream
Tssr40391	transcription start site region 40391	1279 bp downstream
Tssr40392	transcription start site region 40392	1263 bp downstream
Tssr40393	transcription start site region 40393	1250 bp downstream
Tssr40394	transcription start site region 40394	1240 bp downstream
Tssr40395	transcription start site region 40395	851 bp downstream
Tssr40396	transcription start site region 40396	820 bp downstream
Tssr40397	transcription start site region 40397	717 bp downstream
Tssr40398	transcription start site region 40398	354 bp downstream
Tssr40399	transcription start site region 40399	322 bp downstream