rs32667639 SNP Detail

Summary

• ID
  rs32667639
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:194720831 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CCTTAAAGGG GAGCAGGCTA ATTTCAGTTG TATTTGTAGC AGAGGGAGTT CTACTTTCCA
  CTGATAGTTT ATTTCAACCC TTCAGTAGGC GGTGAAAAAG TTCTATAAAA CTGTTCAGAG
  ATTTGCCAGC ATTGGGGGTG GTGGAGGGGC AGGGTTCATG ATTGGGGAAC TTTCAGGAAG
  AAAGCAGGTG GCCCCTTCCA TAGGAGTTGC ATAGCTAACT ATGAACTACC TGCAGTACAA
  TTATTTCAAG CCAGTAGGTT TTAATAACTA ATGGCAAATC AGCTGCTCAG GAAGCTTCTT
  Y
  TAAGCCTTCA TCCCAGTTGC CTTACCCCAG ATGGCTGCCT TGCCCATTTT GCTGGAAGTG
  GGAGGCTGTT GGAGAATTTG CTGGAAAGAC TTCCCAGCGA CTATGATGCA TCCTGCAGCT
  GCAAAGCTAT TTCAAGCCTT TGATTGAAGA ATCCATGTTC TAAGTCACAT CTAAGGATGT
  GCTGGTAGGA ATAGCTAAGT CCCTCAGCTG TATTTTTTAA TTTACCCCAC TAAAGTAGGA
  GACTGCAGCT CCTCTAAGTA TGACAGATTG GGTCTGTGGT ATTAACTACA CATTAAGTCT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45178091	mCV24145618	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32667639					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:194720831 () rs orientation: forward

Symbol	Name	Function Class
A330023F24Rik	RIKEN cDNA A330023F24 gene	615 bp downstream
Cd46	CD46 antigen, complement regulatory protein	mRNA-UTR
Mir29b-2	microRNA 29b-2	1403 bp downstream
Mir29c	microRNA 29c	889 bp downstream
Mirc29	microRNA cluster 29, including Mir29b-2 through Mir29c	889 bp distal
Rr426755	regulatory region 426755	208 bp distal
Tssr10863	transcription start site region 10863	1405 bp downstream