rs32667829 SNP Detail

Summary

• ID
  rs32667829
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150322845 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAAGCTAG ATAAAAAGGG
  TGGAGGGAGG GATCAACTCC TACAAGTTGT AAGGTCTTTG CAGAGCAAAG TGTGGCACGT
  GGGTGCTCCT CCGCCCCCAT AAAGGAACCA GCCATGGAGA TGCACACATG AAAGTGTAGC
  GCTAGGGATG CTGAGGCTGG AGGATCACTG AGTTCTGGTC AGTCTGGCAT TCATAGAATC
  S
  GGCGAGTAAG AGAGAAGACA AAAGAGTATG GTTGAGGAAT AGTAAGGTTT TGTAACATGG
  TAGGTAAAAA GTAGATACTT TATTCTTGGT GAGTGTACAA AGATCCTTTG TCTTAGAGAA
  GACAAAACCA CAGAAGTAAC TTCTGTGGAA AAAAAAGCTG CCTTTGCTTC AGTGCTTGCC
  ACAAAAGATG TGAGGAACCT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46712634	NES10999452	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32667829					SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46712634	NES10999452	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150322845 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15348	CpG island 15348	588 bp distal
Eno1	enolase 1, alpha non-neuron	within coordinates
Rr377416	regulatory region 377416	783 bp downstream
Rr398880	regulatory region 398880	1858 bp upstream
Rr605239	regulatory region 605239	1426 bp distal
Rr605240	regulatory region 605240	1842 bp proximal
Rr605241	regulatory region 605241	1880 bp proximal
Rr605242	regulatory region 605242	1933 bp proximal
Tssr40390	transcription start site region 40390	1621 bp downstream
Tssr40391	transcription start site region 40391	1608 bp downstream
Tssr40392	transcription start site region 40392	1592 bp downstream
Tssr40393	transcription start site region 40393	1579 bp downstream
Tssr40394	transcription start site region 40394	1569 bp downstream
Tssr40395	transcription start site region 40395	1180 bp downstream
Tssr40396	transcription start site region 40396	1149 bp downstream
Tssr40397	transcription start site region 40397	1046 bp downstream
Tssr40398	transcription start site region 40398	683 bp downstream
Tssr40399	transcription start site region 40399	651 bp downstream