rs32668581 SNP Detail

Summary

• ID
  rs32668581
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:6417036 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCTTAGGG GACATCCCAG
  GGAATGCGCG GTGTGGCTGC TGACCACCTA ATAAACTCCT GAATGATGTT CAGTTTTACT
  GTGCGACAAA GGCTGGGGAC ATGGTCTGTG CCTCCGAGGA GCTATTTTCT GCTGACTGAC
  AGCACAGGGC ATTAAAAATG TGAACTTTGT CTTATACCAG CATTCCTAAG AAAAGTATCT
  R
  CCCAAGCCAC GTAACAAACT TGTTTTAAAT CGTGAAGCGT TTGAATGCTG TTTTTCTTGA
  CTGTTGTAAA TTATTTGGAA GGATTAAGAA TTCAAGAAGA GGGACTAAAC TGTGTTTAAA
  ACCTTGGAGA CCCTGCCAAC GTAGCGGTTC TCTTTGCGGC ATAGAGCTGG CTGTTATTTC
  TTCCTGCCTG CTCTCCTCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49383747	NES12560544	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	G	G	G	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32668581					SNP	G	G	A	G	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49383747	NES12560544	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:6417036 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6920	CpG island 6920	599 bp distal
Dab2	disabled 2, mitogen-responsive phosphoprotein	within coordinates
Rr498795	regulatory region 498795	766 bp distal
Rr498796	regulatory region 498796	927 bp distal
Rr498797	regulatory region 498797	within coordinates
Tssr130460	transcription start site region 130460	874 bp downstream
Tssr130461	transcription start site region 130461	770 bp downstream
Tssr130462	transcription start site region 130462	681 bp downstream
Tssr130463	transcription start site region 130463	484 bp downstream