rs32668582 SNP Detail

Summary

• ID
  rs32668582
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:6416985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTC TGCTGACTGA CAGCACAGGG
  M
  ATTAAAAATG TGAACTTTGT CTTAT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49383748	NES12560542	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	A	C	A	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32668582					SNP	C	C	C	C	C	C	C	C	A	C	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49383748	NES12560542	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:6416985 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi6920	CpG island 6920			548 bp distal
Dab2	disabled 2, mitogen-responsive phosphoprotein			Intron
				Noncoding-Transcript-Variant
Rr498795	regulatory region 498795			715 bp distal
Rr498796	regulatory region 498796			876 bp distal
Rr498797	regulatory region 498797			within coordinates
Tssr130460	transcription start site region 130460			823 bp downstream
Tssr130461	transcription start site region 130461			719 bp downstream
Tssr130462	transcription start site region 130462			630 bp downstream
Tssr130463	transcription start site region 130463			433 bp downstream