rs32670308 SNP Detail

Summary

• ID
  rs32670308
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161079183 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCAG AGGAAGTGGC TTTCTTATTG
  Y
  AGCAAACATT CTGTACCAAT GTCAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45177932	mCV24544938	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs32670308					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161079183 () rs orientation: forward

Symbol	Name	Function Class
Cpgi926	CpG island 926	183 bp distal
Gm70781	predicted gene, 70781	within coordinates
Prdx6	peroxiredoxin 6	403 bp upstream
Rr372334	regulatory region 372334	891 bp downstream
Rr396460	regulatory region 396460	264 bp downstream
Rr396461	regulatory region 396461	within coordinates
Tssr14577	transcription start site region 14577	704 bp upstream
Tssr14578	transcription start site region 14578	474 bp upstream
Tssr14579	transcription start site region 14579	469 bp upstream
Tssr14580	transcription start site region 14580	427 bp upstream
Tssr14581	transcription start site region 14581	85 bp upstream