rs32670939 SNP Detail

Summary

• ID
  rs32670939
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:3647323 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGGGCATGCC CTAAACTAGG
  CACGGTGGTG CATGCCTGTA ATCTTAGGCC TCTGGAGGTT AAAGTGGGAG GATCCGAAAT
  TCAAGGTCAT TCTTAGCTAC CAGGCAGTTT TGAGGCTACC TTGGGATACA TGAAACTCAA
  CCTCTGAAAT CTAGCCAAAT AGATGCAGAG GAGATGAGAA ACCTCAGTGG TACAGGGGCT
  Y
  GCTGGGAAAG CTGGAGGGCT TGAGTTCAGA ACCCCGGTAT CTAGGGAAAA GGAGAACTGG
  ACAGACTGTA ACCTAAGCTC TGGAGAGGTA GAGATGCATG GATCCCAGGG GGCTCATGGA
  TCAGCTAGTT CAGCTGGAAT GGCAAAGCCA ATGTTTAGGG AGAGATTCTG TCTCAAAACC
  TCAGTGGATG TGCTCAGCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46175769	mCV22853525	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss148546641	ENSMUSSNP6330077	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32670939					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:3647323 () rs orientation: forward

Symbol	Name	Function Class
Camsap3	calmodulin regulated spectrin-associated protein family, member 3	within coordinates
Rr180906	regulatory region 180906	1123 bp distal
Rr189485	regulatory region 189485	1078 bp proximal
Rr381636	regulatory region 381636	100 bp upstream
Tssr76064	transcription start site region 76064	799 bp downstream
Tssr76065	transcription start site region 76065	992 bp upstream
Tssr76066	transcription start site region 76066	1016 bp upstream
Tssr76067	transcription start site region 76067	1031 bp upstream
Tssr76068	transcription start site region 76068	1048 bp upstream
Tssr76069	transcription start site region 76069	1120 bp upstream
Tssr76070	transcription start site region 76070	1270 bp upstream
Tssr76071	transcription start site region 76071	1319 bp upstream