rs32672233 SNP Detail

Summary

• ID
  rs32672233
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84466173 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTTC AACTTCCCAA GCTCAGACTG
  R
  AGCCAAGGGA CTCCTGCTTA GAGAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46176029	mCV23004478	ABI	CRAMUS_MOUSE	f	SNP		G	A					G		A
ss51971732	NES14984987	PERLEGEN	MM_PANEL2	f	SNP	G		A	G	G	G	A		G	A	G	A		G	A	G	G		G
ss145361115	ENSMUSSNP6119677	ENSEMBL	ENSEMBL_Sanger	f	SNP			A							A
ss322745685	CHEV_8_86263443	CHEVERUD	SCREENING_POP	f	SNP													A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32672233					SNP	G	G	A	G	G	G	A	G	G	A	G	A	A	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51971732	NES14984987	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84466173 () rs orientation: forward

Symbol	Name	Function Class
Adgre5	adhesion G protein-coupled receptor E5	within coordinates
Cpgi20655	CpG island 20655	1334 bp proximal
Gm46046	predicted gene, 46046	1742 bp upstream
Rr368559	regulatory region 368559	393 bp upstream
Tssr2618	transcription start site region 2618	562 bp downstream
Tssr2619	transcription start site region 2619	846 bp upstream
Tssr2620	transcription start site region 2620	1732 bp upstream
Tssr78289	transcription start site region 78289	1123 bp downstream
Tssr78290	transcription start site region 78290	1095 bp downstream
Tssr78291	transcription start site region 78291	793 bp upstream
Tssr78292	transcription start site region 78292	819 bp upstream
Tssr78293	transcription start site region 78293	937 bp upstream
Tssr78294	transcription start site region 78294	1020 bp upstream
Tssr78295	transcription start site region 78295	1071 bp upstream
Tssr78296	transcription start site region 78296	1091 bp upstream
Tssr78297	transcription start site region 78297	1844 bp upstream
Tssr82049	transcription start site region 82049	517 bp downstream
Tssr82050	transcription start site region 82050	602 bp downstream
Tssr82051	transcription start site region 82051	883 bp downstream
Tssr82052	transcription start site region 82052	1629 bp downstream