rs32672735 SNP Detail

Summary

• ID
  rs32672735
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150224769 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGCTTGGA CAGAGCTGGG
  CTTTTGGACT GCAACATGCC CCCTGGGCTC TGACGCCCCA GCCTCAAAGC TCTGCTGTAA
  GCATATCCCT GACTCTAGTG TGTGTGTGTG TGGGGGGGCA GCCATGGGCC CCTAACACGG
  AGCCCACAGT GTGCCCTAAC CTCTTCTATC TGGGGCTGCT GAGCATGGCA GCGTGGCAGA
  M
  GTGCAGGGTC TCTGCACAGG CCCTGCCGGG AGCTCATGAC TCGCTGTTTA GTGAGATTTG
  GCCCCTGGGC AGAGGAGCCA GTCAGGCCTC CATGTGGACA GAATCTCTCA TTGACTCCAG
  TACCTGGCTT CTTTGCAGGA GGCCAGAAGC TTCGAACCAC AGGACTGTGG CTCTTGATGT
  GAGGGCTCAT TTAAGAGTGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss46712103	NES11004655	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	C	A	A
SNP Consensus Information
SNP					Consensus Type	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs32672735					SNP	A	A	A	A	A	C	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46712103	NES11004655	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150224769 () rs orientation: forward

Symbol	Name	Function Class
Rr398879	regulatory region 398879	1895 bp downstream
Rr605197	regulatory region 605197	1594 bp distal
Rr605198	regulatory region 605198	919 bp distal
Slc2a5	solute carrier family 2 (facilitated glucose transporter), member 5	within coordinates
Tssr1384	transcription start site region 1384	969 bp downstream
Tssr40375	transcription start site region 40375	792 bp downstream
Tssr40376	transcription start site region 40376	1971 bp upstream