rs32672737 SNP Detail

Summary

• ID
  rs32672737
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150224861 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTAGTGTG TGTGTGTGTG
  GGGGGGCAGC CATGGGCCCC TAACACGGAG CCCACAGTGT GCCCTAACCT CTTCTATCTG
  GGGCTGCTGA GCATGGCAGC GTGGCAGAAG TGCAGGGTCT CTGCACAGGC CCTGCCGGGA
  GCTCATGACT CGCTGTTTAG TGAGATTTGG CCCCTGGGCA GAGGAGCCAG TCAGGCCTCC
  R
  TGTGGACAGA ATCTCTCATT GACTCCAGTA CCTGGCTTCT TTGCAGGAGG CCAGAAGCTT
  CGAACCACAG GACTGTGGCT CTTGATGTGA GGGCTCATTT AAGAGTGGGC AGCTGGGGCC
  TAGGAACCCA GCCAGACCTC CAGGGACCAG CCACTGACAC ATGCCTCTGT GTTTTCGCAT
  ACAATTATTT ACACACCGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46712106	NES11004656	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32672737					SNP	A	A	A	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46712106	NES11004656	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150224861 () rs orientation: forward

Symbol	Name	Function Class
Rr398879	regulatory region 398879	1987 bp downstream
Rr605197	regulatory region 605197	1686 bp distal
Rr605198	regulatory region 605198	1011 bp distal
Slc2a5	solute carrier family 2 (facilitated glucose transporter), member 5	within coordinates
Tssr1384	transcription start site region 1384	1061 bp downstream
Tssr40375	transcription start site region 40375	884 bp downstream
Tssr40376	transcription start site region 40376	1879 bp upstream