rs32672739 SNP Detail

Summary

• ID
  rs32672739
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150224879 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGGGGGCA GCCATGGGCC
  CCTAACACGG AGCCCACAGT GTGCCCTAAC CTCTTCTATC TGGGGCTGCT GAGCATGGCA
  GCGTGGCAGA AGTGCAGGGT CTCTGCACAG GCCCTGCCGG GAGCTCATGA CTCGCTGTTT
  AGTGAGATTT GGCCCCTGGG CAGAGGAGCC AGTCAGGCCT CCATGTGGAC AGAATCTCTC
  R
  TTGACTCCAG TACCTGGCTT CTTTGCAGGA GGCCAGAAGC TTCGAACCAC AGGACTGTGG
  CTCTTGATGT GAGGGCTCAT TTAAGAGTGG GCAGCTGGGG CCTAGGAACC CAGCCAGACC
  TCCAGGGACC AGCCACTGAC ACATGCCTCT GTGTTTTCGC ATACAATTAT TTACACACCG
  GTGGCTGGGC ACACACTCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46712109	NES11004657	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	A	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32672739					SNP	G	A	A	A	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46712109	NES11004657	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150224879 () rs orientation: forward

Symbol	Name	Function Class
Slc2a5	solute carrier family 2 (facilitated glucose transporter), member 5	within coordinates
Tssr1384	transcription start site region 1384	1079 bp downstream
Tssr40375	transcription start site region 40375	902 bp downstream
Tssr40376	transcription start site region 40376	1861 bp upstream