rs32673814 SNP Detail

Summary

• ID
  rs32673814
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150322073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGAG AATAGAAAAG TACTTTCTGT
  R
  TAGTTAAGTG GAAGGTTTCA GAGGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45688498	mCV24222432	ABI	CRAMUS_MOUSE	f	SNP		G	A					A
ss46712613	NES10999562	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	A	A	A	A	G		G	A	A		A
ss148050657	ENSMUSSNP3402914	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A					A
ss321428731	CHEV_4_149611725	CHEVERUD	SCREENING_POP	f	SNP											A				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32673814					SNP	G	G	A	A	A	A	A	A	A	G	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46712613	NES10999562	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150322073 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15348	CpG island 15348	within coordinates
Eno1	enolase 1, alpha non-neuron	within coordinates
Rr377416	regulatory region 377416	11 bp downstream
Rr605239	regulatory region 605239	654 bp distal
Tssr40390	transcription start site region 40390	849 bp downstream
Tssr40391	transcription start site region 40391	836 bp downstream
Tssr40392	transcription start site region 40392	820 bp downstream
Tssr40393	transcription start site region 40393	807 bp downstream
Tssr40394	transcription start site region 40394	797 bp downstream
Tssr40395	transcription start site region 40395	408 bp downstream
Tssr40396	transcription start site region 40396	377 bp downstream
Tssr40397	transcription start site region 40397	274 bp downstream
Tssr40398	transcription start site region 40398	78 bp upstream
Tssr40399	transcription start site region 40399	107 bp upstream