rs32677437 SNP Detail

Summary

• ID
  rs32677437
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:63130687 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCTC CATGAACCTA CATTCTGCAT
  R
  GGCACAGTGA AGCCCGGATG GACAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45678974	mCV22875338	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
ss146440567	ENSMUSSNP3556634	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		A
ss321144706	CHEV_4_62873484	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32677437					SNP	A	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:63130687 () rs orientation: forward

Symbol	Name	Function Class
Col27a1	collagen, type XXVII, alpha 1	1559 bp upstream
Cpgi14368	CpG island 14368	1522 bp proximal
Rr593488	regulatory region 593488	1226 bp proximal
Rr593489	regulatory region 593489	1490 bp proximal
Tssr1192	transcription start site region 1192	1574 bp upstream
Tssr37533	transcription start site region 37533	1638 bp upstream
Tssr37534	transcription start site region 37534	1684 bp upstream