rs32682859 SNP Detail

Summary

• ID
  rs32682859
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:46982289 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAATGTCAAT TGAAGGTCAA
  GGGTCAGTTT GGTGAAACCT ATGAGTGTGG AGATGATGGA GACACACAAA GCAATGTCTA
  GTGCTCCATC CACTTTAGCT CCGTCCTAGC CGGCCTCCGA TTGATCCATC TCTCAGTAAC
  CTTCAACTCT ACTTTCTGTT TCCCTTCTCT CTCCCAAGCC TTAGAAACCT CTGCACTTCT
  K
  TGAGACTTCT GTATTGGGTT CACCAGTGGT GATAACAGGG ATGGCTCCCC ATCAGTCTTT
  TCCTTACTCT CACAAGAGAC TGAGAGTAAA GGAAAGAGTG ACTTTGCCAG GTCATGTGAC
  TTGTGAAGCA ATTTGAAGAG CATTTTCTTG GCTCACACTC TAATCCCAGT ACTTGAGTAA
  TGCCAGGGAA CACATCGATT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47698596	NES11316393	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32682859					SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47698596	NES11316393	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:46982289 () rs orientation: forward

Symbol	Name	Function Class
Rr383316	regulatory region 383316	1252 bp upstream