rs32683369 SNP Detail

Summary

• ID
  rs32683369
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:85390130 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTAC CCCGTAACCA CAGATATCCA
  Y
  CACCTCACGA CTGCTCTTTA CTTTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46176970	mCV24192286	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss145391612	ENSMUSSNP4648852	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss322751236	CHEV_8_87187400	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32683369					SNP	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:85390130 () rs orientation: forward

Symbol	Name	Function Class
4930447I22Rik	RIKEN cDNA 4930447I22 gene	within coordinates
Cpgi20702	CpG island 20702	328 bp distal
Cpgi20703	CpG island 20703	534 bp proximal
Cpgi20704	CpG island 20704	1346 bp proximal
Gm26664	predicted gene, 26664	589 bp upstream
Gm50464	predicted gene, 50464	1740 bp upstream
Ier2	immediate early response 2	649 bp upstream
Rr368564	regulatory region 368564	913 bp downstream
Rr368565	regulatory region 368565	398 bp upstream
Rr368566	regulatory region 368566	1352 bp upstream
Rr401023	regulatory region 401023	444 bp downstream
Tssr2627	transcription start site region 2627	1597 bp upstream
Tssr78424	transcription start site region 78424	495 bp downstream
Tssr78425	transcription start site region 78425	710 bp upstream
Tssr78426	transcription start site region 78426	742 bp upstream
Tssr78427	transcription start site region 78427	1037 bp upstream
Tssr82105	transcription start site region 82105	1946 bp upstream
Tssr82106	transcription start site region 82106	1896 bp upstream
Tssr82107	transcription start site region 82107	642 bp upstream
Tssr82108	transcription start site region 82108	486 bp upstream
Tssr82109	transcription start site region 82109	430 bp upstream
Tssr82110	transcription start site region 82110	420 bp downstream