rs32685225 SNP Detail

Summary

• ID
  rs32685225
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150528072 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCTCTTCC TCTGTGGGGT
  CGATCCTCCC CAGAATCCTT CTTCAGTCCT GCTTGCCATC CGTGCCTTGT CCTCTGCTCA
  GCTGCTGCAT CTTAGTGCTC TCTGGTGGGA GCCATGGGGT GGGGGTTACT TGTGGTTTTC
  ATTAGAAATG ATTCCCCCAT AGCAGTTAAA TCATACCTTT CACTCTTGAT ACTGTAGTAT
  Y
  GACTCAGTCT TGCTGGAAGT GCTTTGTTCT GTAATCACAG ACTTCATTTC CTTGAGCCTC
  AGTTTGTTCA CTTGTGAAAC TGCAGCAGCA GCTGTGATGA TGGTGATGGT GGTGATGGTG
  ATGATGGTGA TGATGGTGGT GATGATGATG ATGGTGATGG TGAAGAATTC AGTAGTCATA
  GAGTCAGCCT CAGAGCGCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss46714755	NES11012812	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T	C	C	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs32685225					SNP	C	C	C	C	C	T	C	C	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46714755	NES11012812	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150528072 () rs orientation: forward

Symbol	Name	Function Class
Gm52709	predicted gene, 52709	within coordinates
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr605300	regulatory region 605300	525 bp proximal