rs32685693 SNP Detail

Summary

• ID
  rs32685693
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:5299933 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTATAGGGTC CTATTCCCAT
  TCTTTAGGTT CTATTCACAG TAGATTTTGT TCTGCCCACT ACTCAGATAA TTTTTACTAG
  GTCTCAAAGA TCTGTTCCTG CCTCCTGAAA AACATTTTGA ATAACATTTT AGAGGAGCAG
  AAAAGTTCTG AGTTTCTGAC TTCATTTATG TTATGAGACC TGACCCTTCC CCCAGGGAGT
  Y
  CCAGACATTT CTCAGGCAAC TGTGCACTGT TTATTGCTGG CAGCAAGAGA AGTTGGGTTA
  ACTCCTCTAG GCTGAAGGAT CAGCCATAGT TCCCAGGGTT AAGCCTATAT TTGCACAAAT
  TGATGAAGCT CTCTGCATCT ACTGTGGAGA ATCCTGTGGG GGAATCAATC TCATGGATTA
  GTGTGGGAAT AGCTGGGATC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45180074	mCV24046461	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss148482011	ENSMUSSNP6338633	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32685693					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:5299933 () rs orientation: forward

Symbol	Name	Function Class
Rr22269	regulatory region 22269	1668 bp proximal
Rr370760	regulatory region 370760	1222 bp downstream