rs32686856 SNP Detail

Summary

• ID
  rs32686856
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150529741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAGC AAGTCTCAAT GTGCACACAC
  R
  TGTCAGCAAG TAGCTGGGAC TGGGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45723173	mCV24963600	ABI	CRAMUS_MOUSE	f	SNP	A					G
ss46714782	NES11012800	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A		G	A	A	G		G	A	A	G		A
ss148053353	ENSMUSSNP2939695	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss321429203	CHEV_4_149819393	CHEVERUD	SCREENING_POP	f	SNP											A					A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32686856					SNP	A	A	A	A	A	G	G	A	A	G	A	G	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46714782	NES11012800	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150529741 () rs orientation: forward

Symbol	Name	Function Class
Gm52709	predicted gene, 52709	within coordinates
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr377422	regulatory region 377422	355 bp upstream
Rr605300	regulatory region 605300	715 bp distal
Rr605301	regulatory region 605301	1368 bp proximal