rs32687441 SNP Detail

Summary

• ID
  rs32687441
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150536164 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TATAGGGTGG AAATCGTTGG TGGTGATTTT AAAGATGGGC TCATGAGAAT GAAGTGGTAC
  TGGTTATAGT GGCTCATGCT TGAAACTCCA GCCCCTAGGA GAGTAGGAGG ACCAAGAGTT
  TAATGCCAGC CTAGGCTACA TTGTGAGATA ATGTCTCTAA AATAAAAACA AAACCACAGT
  GAAGCAAGGG TCGGGTGGGA AGCTTGCCTT TGCCCTGGTG GAACTGCTGA TGTAGGTGTC
  TGCCCCCTTT CCTGCATTCT CTGGCTAGCA GAGCCCTAGC TGATGCTTCT CAGAAGCAGA
  K
  TTCAGGTGAA GTGTAGGGTC AGTGCTTGCT TCTGTTTATC TTTTTATATT TTCTAAATTT
  CTTTTTGCTC ACAGAGATGC AAACACACAG GTAGATCATT TGTGTAGTTC GTGAATCAAC
  TGTCTCAGGC CTTTACTGGC TGCCTGTTCC CTTGTGGTAA CAGTCCTTTC TTTCCCTACA
  GAATTACCAA CACCCCGGTG TAGTCTAGTC CTTTTTTTTT TTAATGTCTC ATTTTTGAAT
  GTGGCTTTCT AGGCAACAGG TTTTTTGGTC AATGATAAGT GGTCCAAGTC TGTTACATAT
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss45721827	mCV24963822	ABI	CRAMUS_MOUSE	f	SNP		T	G					G
ss46714890	NES11012726	PERLEGEN	MM_PANEL2	f	SNP	T		G	G	G	G	G	G	G	T	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs32687441					SNP	T	T	G	G	G	G	G	G	G	T	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46714890	NES11012726	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150536164 () rs orientation: forward

Symbol	Name	Function Class
Gm52709	predicted gene, 52709	within coordinates
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr605303	regulatory region 605303	603 bp distal