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rs32687916 SNP Detail
Summary
  • ID
    rs32687916
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr8:3765873 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                TCCAGCTGGA AAAAAACAGA
    TTGGCCATTG TCCTGATTCC ATAATGGCAG TCAAGGTTGC CTCTTAAAAT TGAGGTGTAT
    GATTTAAATA ATGCATAATG AAGAGATGAG AATTGTGGAA AAAATTCAGT ATTAAAGGTA
    ATCAGCCTGA TAGAGACCCA TATTATCTGA ACCTCCTCCT TCTTTGTGCC AATTAGTTGT
    Y
    ATGTCAGAGT GTAAAACTGA GCTTCCACTA ATGGGGTGAG ATGCAGTCAT CACTTATATT
    ATAGATAAAA GACAGAGGCC ACTGAGTAGT CGCTAGCCCA GTTTTGGTTC TAGCACATCC
    TTCCTGGAAA GTAAATTACA AAGTATGTTC CTTTGTGGGT TACAGAGATC ATTCTTTTCC
    AATACAGATC TGGAGGATAG                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
129X1/SvJ
A/J
C57BL/6J
DBA/2J
ss46178411 mCV22849382 ABI CRAMUS_MOUSE f SNP T T C C C
ss148548672 ENSMUSSNP2584852 ENSEMBL ENSEMBL_Sanger f SNP T C C
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
129X1/SvJ
A/J
C57BL/6J
DBA/2J
rs32687916 SNP T T C C C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr8:3765873 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Clec4g C-type lectin domain family 4, member g within coordinates
Gm16553 predicted gene 16553 within coordinates
Tssr80223 transcription start site region 80223 1674 bp downstream
Tssr80224 transcription start site region 80224 1689 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory