rs32689089 SNP Detail

Summary

• ID
  rs32689089
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:152116931 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGCGATCC ACACTTTGCC
  AGTCAGGTTG GCCAGCACCA CAGACCTGAA GAACACTCCA GCCAGGTGCC GGTTAGAGAA
  GACCACGACC ACGGTGGTCC TGGCTCGAGC CAGACGCAGC ATCATGCGCT GCATCCTTGG
  GTCACCCGCC TGGGCGGAGA GAGGCACCAC GTCCTTGAAG GCGACGCAGA TGCCCCGTGG
  R
  GTGGCCAGCT CCTCCAGCGC CTGTACGCCC AGCTGCCCGT AGTCACCATA GCTGCCAACG
  AGCGAGATCC AGACCCAGCC GAAGCTCTGC AGCAGCCGCA CTATGACTTC CACCTGGTAC
  TTATCGCTGG GGATGGTGCG CAAGAAGGAC GGGAACTTGC GCTTCCCACT GAGGATCACG
  CTGCTCGCCT CATAGCTGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45681109	mCV24972462	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss148079351	ENSMUSSNP4796994	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32689089					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152116931 () rs orientation: forward

Symbol	Name	Function Class
Rr377433	regulatory region 377433	within coordinates
Tas1r1	taste receptor, type 1, member 1	within coordinates
Tssr44802	transcription start site region 44802	1081 bp upstream
Tssr44803	transcription start site region 44803	1279 bp downstream