rs32690167 SNP Detail

Summary

• ID
  rs32690167
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180106321 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAACATAGTT TGTTTGATTG
  AGACAGGCTC TCCTGTGGCC AAGGCTGGCC TTGAATGTGG TATGTTGTAG AGGCTACCTG
  GAACTTCTGA TCTCCTGCCT CCGCCTTACA AGTGCTGGAA TTACAAAAAT GTGCAACCAT
  GATGACTCGG GGCCGATTTG AATAGGATAA AAGAGAGCAA TCCGTCTGTT ACTCAATGTA
  R
  GACACACAAA GCTTATCTCT TTGCAGACTC TTTCGCTCGT GGGATCAGAT GTGTCATGAA
  CAACTGCCGA GTTCTCTTGA CTGCCAAGGG ACACCTGCCT GAGTCTTCTG GGTCCCCCAC
  AGGTCTTTTA GATGTAAGGA ATCCGTGATG GGTGCCAAGA TACATACCAA GCACAGACAC
  TTTGAGGATT CTGGCTCTAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46715737	NES10668291	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32690167					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46715737	NES10668291	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180106321 () rs orientation: forward

Symbol	Name	Function Class
Gm70819	predicted gene, 70819	1612 bp downstream
Rr367068	regulatory region 367068	985 bp upstream
Rr424444	regulatory region 424444	778 bp distal
Rr424445	regulatory region 424445	581 bp proximal