rs32690669 SNP Detail

Summary

• ID
  rs32690669
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161322305 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAAAACTCC ACCTCCTACA CCCACGGGGC
  TAATTACTAT AAAACATGAC ATTGCATCGT TCATCCATCA CTTGTGGGTA TCTGCTTTCC
  CCAGTTCTCA TTCCATCAGA GAACGAGTTC TAGCCTCATG GAGGAAATGC CTTTGAGAGA
  R
  TCAAGTCCTC AAAGGGCAGA GAGGTGCAAG AAGTCATGGC TCTTGTGCAT AGTGGCTCTG
  TTACTGATGT TGCTCTGTTC TTTGGGTACA CTGATCTATA CTTCACTCAA GGTAAGGTGG
  TCATAGAGTC TACAGCTGCT AATTATATCA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45180761	mCV23101321	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss145915195	ENSMUSSNP284600	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320080916	CHEV_1_163424867	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32690669					SNP	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161322305 () rs orientation: forward

Symbol	Name	Function Class
Rr421810	regulatory region 421810	71 bp distal
Tnfsf18	tumor necrosis factor (ligand) superfamily, member 18	within coordinates
Tssr9690	transcription start site region 9690	80 bp downstream