rs32691175 SNP Detail

Summary

• ID
  rs32691175
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84625975 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTTTGGGGG AGGGGGGCTG TTCTCATCCC ATCCTACCTA
  CGCTCCAGTC CTGGCTTTGC GTCCCTCCCT CGTTTTTTTT TTTAATTAAT TTATTTATTT
  W
  TTTTTTTATT GTAGGTCTGG TCTCCCAGGG TAGCGGGATC CACACCACAT CCCCTTCCTG
  TCGCATCACC CAGGATCCAG ATACTGCTTT TACCTGCCG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46177864	mCV24180767	ABI	CRAMUS_MOUSE	f	SNP	T	A	T
ss145367058	ENSMUSSNP1238379	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32691175					SNP	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84625975 () rs orientation: forward

Symbol	Name	Function Class
Adgrl1	adhesion G protein-coupled receptor L1	759 bp upstream
Cpgi20661	CpG island 20661	1863 bp distal
Cpgi20662	CpG island 20662	39 bp proximal
Gm26721	predicted gene, 26721	within coordinates
Rr186961	regulatory region 186961	within coordinates
Tssr78300	transcription start site region 78300	612 bp upstream
Tssr78301	transcription start site region 78301	742 bp upstream
Tssr78302	transcription start site region 78302	750 bp upstream
Tssr78303	transcription start site region 78303	768 bp upstream
Tssr78304	transcription start site region 78304	1101 bp upstream
Tssr78305	transcription start site region 78305	1246 bp upstream
Tssr78306	transcription start site region 78306	1274 bp upstream
Tssr78307	transcription start site region 78307	1360 bp upstream