rs32691489 SNP Detail

Summary

• ID
  rs32691489
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180106598 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGACTGCCA AGGGACACCT
  GCCTGAGTCT TCTGGGTCCC CCACAGGTCT TTTAGATGTA AGGAATCCGT GATGGGTGCC
  AAGATACATA CCAAGCACAG ACACTTTGAG GATTCTGGCT CTATCACGCC CATTCTGCAG
  ACCAGAAAGG GCTTCAGCAA ACAAAATTTG GAGATGAGTT AGCTGTTCTG CAGTGGCCTC
  R
  GGCTCCACCT AACATGTTTC CAGAGAGAGA GGCAAGCCCG GATAACCCAC GTAAGTATGT
  TGCTGTGCCC TTCCTTCCTG GAAGTTTTCG ATTTTCTTAC CTGGTCATTT TCAACTAAAT
  CTCTAGGTTA TGGAAAAAGA AAGATCTCAT TTGAATGGAG GAAGCCTCCT AATGGGCACA
  TGTAAATCAT GGTTAGAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46715755	NES10668297	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32691489					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46715755	NES10668297	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180106598 () rs orientation: forward

Symbol	Name	Function Class
Gm70819	predicted gene, 70819	1335 bp downstream
Rr367068	regulatory region 367068	708 bp upstream
Rr424444	regulatory region 424444	1055 bp distal
Rr424445	regulatory region 424445	304 bp proximal