rs32691660 SNP Detail

Summary

• ID
  rs32691660
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:34552447 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTTA AATTTTTGAT ATAACGTAGC
  Y
  AAAAGCTGTT TTATGAGTTG CAGTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45680859	mCV23153957	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	T
ss321074931	CHEV_4_34499696	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32691660					SNP	C	C	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:34552447 () rs orientation: forward

Symbol	Name	Function Class
Akirin2	akirin 2	within coordinates
Cpgi14119	CpG island 14119	740 bp distal
Gm68522	predicted gene, 68522	1626 bp downstream
Gm70378	predicted gene, 70378	1890 bp upstream
Rr100806	regulatory region 100806	within coordinates
Rr367598	regulatory region 367598	1817 bp downstream
Tssr36766	transcription start site region 36766	1785 bp downstream
Tssr36767	transcription start site region 36767	1759 bp downstream
Tssr36768	transcription start site region 36768	1531 bp downstream
Tssr36769	transcription start site region 36769	1518 bp downstream
Tssr36770	transcription start site region 36770	1502 bp downstream
Tssr41190	transcription start site region 41190	1000 bp upstream