rs32691759 SNP Detail

Summary

• ID
  rs32691759
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161079013 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGACCGAGA ATTGCGGGGA CTTGTAGATC TGGCGGCTCT
  GCAAAGATGC TCTAGGAGAA GGCGGAATTA GCGCAAATCC TCTGACATTC TCACCCCTGT
  Y
  GGACTTACAA TTTAGAGGTC TTGGGGTATA GCCCTCTTTT ACTATGAGCA TCTAGTAGTT
  GGCTGAATGA CTGACTACTC AGCCAACCTG GGTTTCAGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss45181132	mCV24544948	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs32691759					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161079013 () rs orientation: forward

Symbol	Name	Function Class
Cpgi926	CpG island 926	13 bp distal
Gm70781	predicted gene, 70781	within coordinates
Prdx6	peroxiredoxin 6	233 bp upstream
Rr372334	regulatory region 372334	721 bp downstream
Rr396460	regulatory region 396460	94 bp downstream
Rr396461	regulatory region 396461	67 bp upstream
Rr421776	regulatory region 421776	691 bp distal
Rr421777	regulatory region 421777	289 bp distal
Rr421778	regulatory region 421778	within coordinates
Rr421779	regulatory region 421779	1267 bp proximal
Tssr14577	transcription start site region 14577	534 bp upstream
Tssr14578	transcription start site region 14578	304 bp upstream
Tssr14579	transcription start site region 14579	299 bp upstream
Tssr14580	transcription start site region 14580	257 bp upstream
Tssr14581	transcription start site region 14581	59 bp downstream