rs32692439 SNP Detail

Summary

• ID
  rs32692439
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180107296 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAGTGACA TGGTGACTGC
  TGTGGGTCTT TCTGTTAGAA AGGCTGCAGA TGAGCAGCAA AGACAAGATG GGCCTGCAGT
  AAGTACAGAG CAGTTTGGGA TCGAAGAACC CAGGTTTTCA TTTCTAAATG GTAAACCCAA
  AAGGGTTGGC CCTGAGTTTA TGCAACGTCC CTCCGCAGTG TGCCAGCAGT TTGAGAGGCT
  Y
  GGAGCTGTGC CAGCAGTTTG AGAGGCTCCG CAGGAGAGGT GAAATGACTT TTGTTCTTCC
  CTCTGTAACT AAAGCTGGCC ACACCCTCTG GCATCTGACT GAGTAGGAAA AAGACCTCAG
  GGTGTTCTGT GCTGGGGACA CCAGGTGACT GTACAGAGTC CATGCCAGAC AGGAGATTCC
  AGCAGGTGCA GGGCTGACGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46715767	NES10668301	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	C	T	T	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32692439					SNP	T	T	T	C	T	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46715767	NES10668301	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180107296 () rs orientation: forward

Symbol	Name	Function Class
Gm70819	predicted gene, 70819	637 bp downstream
Rr367068	regulatory region 367068	10 bp upstream
Rr424444	regulatory region 424444	1753 bp distal
Rr424445	regulatory region 424445	within coordinates