rs32693799 SNP Detail

Summary

• ID
  rs32693799
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180108932 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTGAATGT ATGGCCTAGA
  AAACTTAATA AATAGCACAT TGATAGATCA ATGCTGCCAA CACTCATTCA ATACTCCAAT
  GTAAGTCCCA GTCTACTTAA GAGACCATCA GTTTTAAGTG TTTTTAAAGC ATACCCTAAA
  ACTAAACCAG ACTAAAATAT TAGGTACGGG TTTGGAAAAC AGAGGTGAGT AGCTTCTAAG
  K
  CCAGAAACCA TGGGAGGAAA TATCAAGAAA ACATTGAATG AATTTGATGT TATTGAGTTT
  GTTCCTTAAA AAGGAAATAA AATAAAATAA AATGTATATA TGTATCTGTT CCTGTATTGC
  AGGTACCTGA CTAAGCCAGG AGAGGGTGTT GGATCACTTG GAGCTAGAGT TAGAGACGGT
  TGTAAGCAGC CCAGTGTAGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46715788	NES10668230	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	T	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32693799					SNP	G	G	G	G	G	G	G	G	T	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46715788	NES10668230	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180108932 () rs orientation: forward

Symbol	Name	Function Class
Gm70819	predicted gene, 70819	within coordinates
Rr367068	regulatory region 367068	1325 bp downstream
Rr424445	regulatory region 424445	942 bp distal
Rr424446	regulatory region 424446	1188 bp proximal