rs32694479 SNP Detail

Summary

• ID
  rs32694479
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:81228612 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCCTTGCC CTCCGTGAGG
  ATGACCCTAG AGTGAAGAAC AATGTCTCTT GTGAGCAGGC CAGACTTATT GCCTGGGGAA
  GCCAAGAGAG TGGCCAGAGA GAAATACTGG GCAATGGGGC ACAGATGTAA CTTTGGGACT
  CTGTGAGGAG AGAGATAGAA CCTGTGGGGA GCTGTGTGGC CAGTGCCCTG ACAAGGATGT
  M
  TGTTTCTAGG CATATGGTGC TAGCAGGAGA ATGGAGGACT ATGAAGAAAC CTAGGGGAGG
  GGTGAGGACA ACTGTCTAGA CAGAAATAGG GATGCAGGTA TGACCAGAGA CCCTGAAGTC
  AGATAGACCT GACTGTTAAG CTCTGTCAGT TCTAACCCTG TAATTTGACA AGGTTCCTCA
  CCTCTCTGGA TTTCAATGTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47199822	NES11200906	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32694479					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47199822	NES11200906	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:81228612 () rs orientation: forward

Symbol	Name	Function Class
Gm60593	predicted gene, 60593	424 bp downstream
Rr257838	regulatory region 257838	within coordinates
Rr268489	regulatory region 268489	1973 bp proximal
Rr269744	regulatory region 269744	177 bp proximal
Smoc1	SPARC related modular calcium binding 1	within coordinates