rs32697473 SNP Detail

Summary

• ID
  rs32697473
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:156572676 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCACT CCTCTCCTCT CCCCTTCCTC
  Y
  TCCAGGCTGA CCGGCCATCT TTGCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45182053	mCV24597242	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss145803948	ENSMUSSNP112482	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32697473					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156572676 () rs orientation: forward

Symbol	Name	Function Class
Gm39683	predicted gene, 39683	within coordinates
Gm69913	predicted gene, 69913	within coordinates
Rr421238	regulatory region 421238	840 bp distal
Rr421239	regulatory region 421239	617 bp distal
Rr421240	regulatory region 421240	within coordinates
Rr421241	regulatory region 421241	118 bp proximal