rs32697577 SNP Detail

Summary

• ID
  rs32697577
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:91176291 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAG AGCAAGAGGG GGTGCCGGGG
  K
  GAGGAGCCGT AAGAAAGTGC TGTTT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45182688	mCV24389918	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	G
ss144943388	ENSMUSSNP790265	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss319839831	CHEV_1_93145146	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32697577					SNP	G	G	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:91176291 () rs orientation: forward

Symbol	Name	Function Class
Cpgi571	CpG island 571	1327 bp proximal
Rr366958	regulatory region 366958	1376 bp upstream
Rr415585	regulatory region 415585	628 bp distal
Rr415586	regulatory region 415586	within coordinates
Rr415587	regulatory region 415587	1252 bp proximal
Tssr8065	transcription start site region 8065	1624 bp upstream
Tssr8066	transcription start site region 8066	1728 bp upstream
Tssr8067	transcription start site region 8067	1742 bp upstream
Tssr8068	transcription start site region 8068	1913 bp upstream
Tssr12938	transcription start site region 12938	1471 bp downstream
Ube2f	ubiquitin-conjugating enzyme E2F (putative)	1121 bp upstream