rs32698459 SNP Detail

Summary

• ID
  rs32698459
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:91261636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATTG CTAAGAATAC CAGTTTTGAA
  R
  TGTTGGAGAG AAATGGGCCT ACCCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss45682616	mCV25324420	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss146983085	ENSMUSSNP1071224	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs32698459					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:91261636 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14444	CpG island 14444	793 bp distal
Cpgi14445	CpG island 14445	318 bp distal
Cpgi14446	CpG island 14446	951 bp proximal
Elavl2	ELAV like RNA binding protein 1	within coordinates
Mir6402	microRNA 6402	36 bp upstream
Rr595258	regulatory region 595258	1376 bp distal
Rr595259	regulatory region 595259	1733 bp distal
Rr595260	regulatory region 595260	840 bp distal
Rr595261	regulatory region 595261	30 bp distal
Rr595262	regulatory region 595262	564 bp proximal
Tssr42416	transcription start site region 42416	1427 bp upstream
Tssr42417	transcription start site region 42417	1399 bp upstream
Tssr42418	transcription start site region 42418	1352 bp upstream