rs32700157 SNP Detail

Summary

• ID
  rs32700157
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:77041245 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGCAGCTAA GGAGGTTTGA
  CGAGCTGAAG GAGTTGAAGC TGAGTAAGGA ATTCCAGGAC TTAGAGGAAG TGATGGAGAA
  GAGTATCAGA GAAGCCCTGG GCCATCAGGA GAGGCTGAAA GCTGAGCATC GACACAGAGC
  CAAGATTCTC AAGCTAACGC TTCCAGAGGC AGAGCAGCGG CAGCAATAGC AGCAGCATCG
  Y
  GTGAAGCAGC CAGAGCAAGA GCAGCTTCTG AAGGAGGAAG GCCAGATCTG GCTGGGAGTC
  ATGAAAGTGC AGAGATGGAG TTGTAGACCT GCAGGCTGGG GACAGTGTCT AGCCCAGGCA
  GGGCCAGGGT ACAAAGCACG GGGGGCGGGG GGGGGGGGGG GGACCAGCTT GTCCTAGCAG
  AGATGATTCT GTCCTTGACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	MSM/Ms
ss45182363	mCV23073448	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss144722391	ENSMUSSNP6448072	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	MSM/Ms
rs32700157					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:77041245 () rs orientation: forward

Symbol	Name	Function Class
Gm70876	predicted gene, 70876	within coordinates
Tfdp1-ps	transcription factor Dp 1, pseudogene	1262 bp upstream
Tssr7562	transcription start site region 7562	1258 bp upstream