rs32702017 SNP Detail

Summary

• ID
  rs32702017
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:44133926 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCTGTGTC TGGCTTCCTT
  ACATTCACTG GAACATGAGA CAAGAGGTTT ATGGTTACTG TTTTCTTACA TGGATCGTTT
  GGCCATCCAT TGTTTGTGTA TCTATCTCTA CAAGCAGGGC CTGCGGTAAG TCACACTGTG
  AAAATGGCAG GTTTTCTTCA GTGTTTCATT GGCCCATAGC CAGCCAGCCT CCAATAGAGC
  K
  TAGAAGGCTT GTCACCACCC CTTCAGGGTT TCCTGTCCTG AAAGCATGAG GCCAATCATA
  GTCCTGAGCA CCCAGCCTGT TATTTCAGCA TAAGCCTTAT CTCTAAGAAC TAGTATTTCC
  AGATCCCCAC TGAGCAGCTA GGAAGATAAG CTATGACAAA CAGGGCTAGC CTTGTGTTAC
  TGTCTTTCGA GATGAACTGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48200929	NES12140223	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	G	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32702017					SNP	T	T	T	T	T	T	T	T	T	G	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48200929	NES12140223	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:44133926 () rs orientation: forward

Symbol	Name	Function Class
Rr321315	regulatory region 321315	74 bp proximal
Rr321316	regulatory region 321316	1075 bp proximal
Sidt1	SID1 transmembrane family, member 1	within coordinates