GGGCCACCTG GCAGGGAAAC CCAGGAACAT GAAGGGCACC TCAGCTCTCG GGCAGTAAAA ACAAAGACTG GTTTGCAGGG ATGGCAGTCC CCTTTGGCAG CAGCTCAGGA AAGTCAGGCT TGGGGGAGAA GAATTACCTG AAGCAAGGTC TCTAGTGCAA GATCTTTCTT TGCTGTGGTC CCTAGAGTCC CAGCTACATG Y GATGGCTGTC CGTGAAAACA TCCAAAGTCC CAGAGCAAGA GGGAAAGAGA AGAAAGTAGC CCAGACCCCA GACCTTTCCA GTCACGAGTG TTTTGGATAA GGGAGATAGA CAGATGAGGG ACAGGAAGAT GGCATGTCCT GCAGGGTCTC AGGCACACAG AGAGTGGGGT GTGAAGTGAG TGGGGGAGGG GAGTATCCAC Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss46717150 | NES10686950 | PERLEGEN | MM_PANEL2 | f | SNP | C | C | T | C | C | C | C | C | C | C | T | C | C | C | C |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs32702828 | SNP | C | C | T | C | C | C | C | C | C | C | T | C | C | C | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss46717150 | NES10686950 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr1:180233839 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm39712 | predicted gene, 39712 | 339 bp upstream | ||||||
Itpkb | inositol 1,4,5-trisphosphate 3-kinase B | Intron | ||||||
Rr424494 | regulatory region 424494 | 316 bp proximal | ||||||
Rr424495 | regulatory region 424495 | 992 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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