rs32704282 SNP Detail

Summary

• ID
  rs32704282
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:160940999 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTCTCTCCT CATCAAGTCT AATGCTTGAG
  TACTAAGGCT ATTCTGCTAT AAATTTCCTA TTTCTCTAAA TGTTTCAGCT ATAGTCAATC
  ATTTTAGCCA TTCTGTTCTG TTTTGAAACT GGGTTTCTAC ATCCAAGACT GGTCTGGCAG
  Y
  cactctataa ctcaggctgg cctggaactc atgatatagt cgaagatggc cttgaactcc
  ttcctggtaa tcctcctgtt ccaacctccc aagGACAGGA CAGCCTGGCT TACAATTTAA
  CTCTAAAATG GATATCCACT TCACAAAGAT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45183307	mCV23480881	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss145906387	ENSMUSSNP128694	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
ss320080346	CHEV_1_163043560	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs32704282					SNP	T	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:160940999 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Klhl20	kelch-like 20			Intron
				Noncoding-Transcript-Variant
Rr421756	regulatory region 421756			1260 bp proximal