rs32704589 SNP Detail

Summary

• ID
  rs32704589
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124794073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTTTTCAG ACAGGCATCT
  CACTATGTAG CTCTGGCTGT CCTGGAGCTC ACTATGTAGA CTTGGCTAGC CATAAACGCA
  CAGAGCTCTG ACTGCCTCTG GCTCCTGAGT ATGGGATTAA ATGCATGCGC CTCCCAGATC
  CTGTCTGATT TTTCTATGCT GTTTCTTTGT TCTTTGGCCT GATCCAATGG CATCTACCTC
  R
  GTTCTTTAAG AAATAAAACC CCCAGTCTCA CAGGAAGATC CTAACTAAAA TCCTGTAAGT
  ACATTTTCAT TGTTTTCATT AGCTGTGTGG GAAAGTGAAA GGATGCCATA CAGATGAACT
  AATAGCTCTG CACACATGGA CTCAGTAGAG ACCAAAGGAA GAACCAGTCT GCTCTAAAAC
  GAATGCATTC CTTGTCTGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss46180139	mCV23473106	ABI	CRAMUS_MOUSE	f	SNP	A		G	A
ss145839242	ENSMUSSNP54715	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs32704589					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124794073 () rs orientation: forward

Symbol	Name	Function Class
Gm29897	predicted gene, 29897	within coordinates
Rr672611	regulatory region 672611	89 bp distal
Tssr80018	transcription start site region 80018	546 bp downstream
Tssr80019	transcription start site region 80019	538 bp downstream
Tssr80020	transcription start site region 80020	195 bp downstream