rs32704625 SNP Detail

Summary

• ID
  rs32704625
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:44135981 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTAGGAGG AGTTTGTCTG
  TAATGCACTC AGTCAGTGTA TAAAAAAGAA AAAAACCCAG AGAATGAGTC CCTGGGTTTA
  GTCTCAAGCC AAAAAATAGT TATTTTTACC TCTTTATCCC CCTCACAAGA GCAAGGCAAA
  GAGATGGCAC AGATAAATAT GGGGGAGGGG GAGAAGCCAT GCACAGATGA GCAAATCTAG
  Y
  TGGTTGATAG GATGTCCCAC CAGCACAGGC TGGTGCTTCT CTTGAAGGAA TGGAGCCTGG
  AGATGCTAAA GCCAGAGGGA CTCCACTGGG ATTGTGAAAC TTGTGTATAA CCTGTGAGGA
  AGCCTAGTAA GATGGAAAAG CGTAGCTGTT GGTGTGGGAG GGCCAGGCAT CCCATGACAA
  GTTTTAGTCT TCTAGACATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48200961	NES12140183	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32704625					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48200961	NES12140183	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:44135981 () rs orientation: forward

Symbol	Name	Function Class
Rr321315	regulatory region 321315	1581 bp distal
Rr321316	regulatory region 321316	781 bp distal
Rr323669	regulatory region 323669	824 bp proximal
Sidt1	SID1 transmembrane family, member 1	within coordinates