rs32705165 SNP Detail

Summary

• ID
  rs32705165
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84626682 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCCTCTGCC CACTTTTCCT TGGGGGAGGC GAGTGGAACT
  CCAGGCCAGG TTTCCGGGCC CTTCCTCGGG GCGCACGGGA GGGCTGCGGA GACTAGTCCC
  S
  GGCGGGTAGT CCAGGCCAGG TTTTGCGCTT GTCCGCCGCC CCCCTCCCGG AGCCGGCGGG
  CCCGGCAGCG CCGAGAGCAG GCGGCTTGTC ATTGCTGGT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss46180886	mCV24181490	ABI	CRAMUS_MOUSE	f	SNP	C	G
ss322746691	CHEV_8_86423952	CHEVERUD	SCREENING_POP	f	SNP			G	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs32705165					SNP	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84626682 () rs orientation: forward

Symbol	Name	Function Class
Adgrl1	adhesion G protein-coupled receptor L1	52 bp upstream
Cpgi20662	CpG island 20662	within coordinates
Gm26721	predicted gene, 26721	326 bp upstream
Rr186961	regulatory region 186961	within coordinates
Tssr78300	transcription start site region 78300	84 bp downstream
Tssr78301	transcription start site region 78301	35 bp upstream
Tssr78302	transcription start site region 78302	43 bp upstream
Tssr78303	transcription start site region 78303	61 bp upstream
Tssr78304	transcription start site region 78304	394 bp upstream
Tssr78305	transcription start site region 78305	539 bp upstream
Tssr78306	transcription start site region 78306	567 bp upstream
Tssr78307	transcription start site region 78307	653 bp upstream