rs32705461 SNP Detail

Summary

• ID
  rs32705461
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95720731 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTGGACTA CATTGCAAGA
  CCTTCTTCCC TCAAAGGGAA AAAAAAAGTC ACTGGGAGAT TTCATGCAAA AATCTACCCT
  TCTGCTTCTC TAGAGAACTT GGGTGCTCTG AGATTTTGGG GTCTCCCCAA GACAGATCCC
  TTAAGCTCTA GGACCCGTTC TCTCGAGTGT GAACCCAGCT TGTCCCTGCT AGTAACCTGC
  Y
  TTAGCCCCAG GCAGCCTCAG GACGAAAGCT CTCACGCTTG GGTACAGACA AGTTGGAGAG
  CCCGCGCTGT AAGCCAGGCA GTGACGCAGT CCATGCAGCT GCCAACGGTT GCCAGGGGAA
  CGGTTGCCAG GGGCTGCTGT CACCTGCGCC CCTTCCTCCC CCTTGGCGCT GGAGGCCCGG
  GCTTCTCAGC TCAGCTTCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46180735	mCV24609570	ABI	CRAMUS_MOUSE	f	SNP		C					T
ss51973975	NES14993160	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	T	C	C		T	T	T	T	C	T	C	C	T
ss145637878	ENSMUSSNP690452	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32705461					SNP	T	C	C	T	C	C	T	T	T	T	T	C	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51973975	NES14993160	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95720731 () rs orientation: forward

Symbol	Name	Function Class
Adgrg1	adhesion G protein-coupled receptor G1	within coordinates
Tssr78941	transcription start site region 78941	1401 bp downstream
Tssr78942	transcription start site region 78942	1229 bp downstream
Tssr78943	transcription start site region 78943	1166 bp downstream
Tssr78944	transcription start site region 78944	135 bp upstream
Tssr78945	transcription start site region 78945	262 bp upstream
Tssr78946	transcription start site region 78946	290 bp upstream
Tssr78947	transcription start site region 78947	590 bp upstream
Tssr78948	transcription start site region 78948	642 bp upstream
Tssr78949	transcription start site region 78949	690 bp upstream
Tssr78950	transcription start site region 78950	737 bp upstream
Tssr78951	transcription start site region 78951	1488 bp upstream
Tssr78952	transcription start site region 78952	1580 bp upstream
Tssr78953	transcription start site region 78953	1601 bp upstream
Tssr78954	transcription start site region 78954	1647 bp upstream