rs32705910 SNP Detail

Summary

• ID
  rs32705910
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:180235266 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTTT TATGGAAAGA CCAAAAGAAA
  R
  AGAAGCTAAG AAGAAGGCAT TTTTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss46717198	NES10686981	PERLEGEN	MM_PANEL2	f	SNP	A		A	G	A	G	A	G	G		G	A	G	G
ss146380461	ENSMUSSNP2414053	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A					G
ss320159864	CHEV_1_182337832	CHEVERUD	SCREENING_POP	f	SNP										A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs32705910					SNP	A	A	A	G	A	G	A	G	G	A	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46717198	NES10686981	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180235266 () rs orientation: forward

Symbol	Name	Function Class
Gm39712	predicted gene, 39712	1766 bp upstream
Itpkb	inositol 1,4,5-trisphosphate 3-kinase B	Intron
Rr396659	regulatory region 396659	1215 bp upstream
Rr424494	regulatory region 424494	within coordinates
Rr424495	regulatory region 424495	414 bp distal
Rr424496	regulatory region 424496	1074 bp proximal