rs32706502 SNP Detail

Summary

• ID
  rs32706502
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:128517876 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCTC TTTAGTGGAA CCAATTAGGA
  R
  AGTCTTTGCT TAGAACAAAA GGACA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45183055	mCV23203434	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss145462241	ENSMUSSNP3678044	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
ss319965168	CHEV_1_130486716	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32706502					SNP	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:128517876 () rs orientation: forward

Symbol	Name	Function Class
Cpgi697	CpG island 697	645 bp proximal
Cxcr4	C-X-C motif chemokine receptor 4	within coordinates
Rr28453	regulatory region 28453	within coordinates
Rr366855	regulatory region 366855	944 bp upstream
Tssr8536	transcription start site region 8536	815 bp upstream
Tssr8537	transcription start site region 8537	1138 bp upstream
Tssr8538	transcription start site region 8538	1166 bp upstream
Tssr8539	transcription start site region 8539	1180 bp upstream
Tssr13461	transcription start site region 13461	1677 bp upstream
Tssr13462	transcription start site region 13462	1507 bp upstream
Tssr13463	transcription start site region 13463	1407 bp upstream
Tssr13464	transcription start site region 13464	1365 bp upstream
Tssr13465	transcription start site region 13465	1352 bp upstream
Tssr13466	transcription start site region 13466	1281 bp upstream
Tssr13467	transcription start site region 13467	1239 bp upstream
Tssr13468	transcription start site region 13468	1153 bp upstream
Tssr13469	transcription start site region 13469	1099 bp upstream
Tssr13470	transcription start site region 13470	1009 bp upstream
Tssr13471	transcription start site region 13471	937 bp upstream
Tssr13472	transcription start site region 13472	869 bp upstream
Tssr13473	transcription start site region 13473	854 bp upstream
Tssr13474	transcription start site region 13474	793 bp upstream
Tssr13475	transcription start site region 13475	772 bp upstream
Tssr13476	transcription start site region 13476	760 bp upstream
Tssr13477	transcription start site region 13477	694 bp upstream
Tssr13478	transcription start site region 13478	677 bp downstream
Tssr13479	transcription start site region 13479	706 bp downstream
Tssr13480	transcription start site region 13480	1028 bp downstream