rs32709705 SNP Detail

Summary

• ID
  rs32709705
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:89739641 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGTG TTTACGGGAA TATCTGGGCC
  Y
  GGATGGAAGA GCTCTAGAGA TGTGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46181322	mCV24231556	ABI	CRAMUS_MOUSE	f	SNP						T		C
ss52487146	NES15665429	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	C	T		T	C	C	C		C	C	C	C		C
ss145495082	ENSMUSSNP2443021	ENSEMBL	ENSEMBL_Sanger	f	SNP		T						C
ss322769785	CHEV_8_91536912	CHEVERUD	SCREENING_POP	f	SNP											C					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32709705					SNP	C	T	C	C	T	T	T	C	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52487146	NES15665429	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:89739641 () rs orientation: forward

Symbol	Name	Function Class
Rr366841	regulatory region 366841	within coordinates
Rr667276	regulatory region 667276	within coordinates
Tssr78677	transcription start site region 78677	358 bp downstream
Tssr82374	transcription start site region 82374	550 bp upstream