rs32711742 SNP Detail

Summary

• ID
  rs32711742
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:34922222 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTCATGGGAT AATGGCCTCT GGGAGAGGAT TTGCAGAATG
  GATGAGATTC AAATGGGCAG ATGAGGGAAG CAATGCCCGA GTCTGAGTCA GAGCAGAAGC
  R
  TGGAGATGCA AACACAGGAG GGAAAGCTAT GAACGTGTGC TGGAGAGGAC CCGGGAGGGG
  TATCCACGGC TGGTTAGTCT GAAGAGGAGT TTTCACGGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46181916	mCV23254643	ABI	CRAMUS_MOUSE	f	SNP		G					A		G
ss50525781	NES14089084	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A	G		A	G	A	A		A	G	A	A		G
ss149109235	ENSMUSSNP1732462	ENSEMBL	ENSEMBL_Sanger	f	SNP		G							G
ss322578187	CHEV_8_35518122	CHEVERUD	SCREENING_POP	f	SNP												G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32711742					SNP	G	G	G	G	A	G	A	A	G	A	A	G	A	G	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50525781	NES14089084	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:34922222 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20247	CpG island 20247	466 bp proximal
Gm39159	predicted gene, 39159	within coordinates
Gm45349	predicted gene 45349	within coordinates
Gm46038	predicted gene, 46038	1850 bp upstream
Rr400818	regulatory region 400818	260 bp upstream
Rr662016	regulatory region 662016	267 bp proximal