rs32714938 SNP Detail

Summary

• ID
  rs32714938
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:172034611 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAATT TGGATTGGGG GATTTGGAAG
  R
  CCTATGGCCT CTGGGTTCTC TTAGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45184126	mCV23614944	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss120007349	PARCsnp_1.17753	PARC_SEQ	INBRED	f	SNP			A	G
ss120010250	PARCsnp_1.07392	PARC_SEQ	INBRED	f	SNP			A	G
ss146183832	ENSMUSSNP6852362	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320123201	CHEV_1_174137175	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32714938					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:172034611 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1038	CpG island 1038	91 bp distal
Gm17224	predicted gene 17224	within coordinates
Pea15a	proliferation and apoptosis adaptor protein 15A	313 bp upstream
Rr396578	regulatory region 396578	196 bp upstream
Rr423484	regulatory region 423484	1568 bp distal
Rr423485	regulatory region 423485	251 bp distal
Rr423486	regulatory region 423486	within coordinates
Tssr294	transcription start site region 294	411 bp upstream
Tssr295	transcription start site region 295	361 bp upstream
Tssr296	transcription start site region 296	285 bp upstream
Tssr297	transcription start site region 297	251 bp upstream
Tssr15164	transcription start site region 15164	379 bp upstream
Tssr15165	transcription start site region 15165	289 bp upstream
Tssr15166	transcription start site region 15166	258 bp upstream
Tssr15167	transcription start site region 15167	657 bp downstream