rs32715689 SNP Detail

Summary

• ID
  rs32715689
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:47532966 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAACTCTCT TAATGGGCAA
  GGGCTCTGAT GGTTGCAGGC TAACTGTGGT TTTGAGTGAA CTCAGAATCT GTTGGTGGTA
  AGTGATGTTG TTTAAATAGA GACCTTATTG GATCGACCCT CGGGTGGCGT TTGCAACTGC
  AGTGCGGTAG TTAACCCCCT GTGAGTCACA GGAAGAAGCG CGGGCTTGTT GCTCAAATTT
  K
  TCTCTTCCTA CATTCTGTAG TTCAGAACAG AACCTGCTAG AAGGCTGTGT TGTTCTTCCT
  CCTATGGAAA TGTGATTGTA AATCACTGTA AGAAAGCAAC CTCAGTGTAA TAACAATTAA
  AAAGATTCAA GCTCGCTTAT AAAAGCAGGT TCAGTATGTG TTTTTTAAAT TGCTAGTCTG
  CTTCATAAAC TTGTTTACAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47702889	NES11317926	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32715689					SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47702889	NES11317926	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:47532966 () rs orientation: forward

Symbol	Name	Function Class
Cadm1	cell adhesion molecule 1	within coordinates
Gm70246	predicted gene, 70246	within coordinates
Rr678285	regulatory region 678285	1865 bp proximal
Tssr84930	transcription start site region 84930	1620 bp upstream