rs32716207 SNP Detail

Summary

• ID
  rs32716207
• Variation Type
  SNP
• Alleles
  A/C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135873175 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATTT GTACTTTAAT CCCAGCACTC
  V
  TGAGGCAGAG GCACACAATC TCTTG                                      
  
  V = A/C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45684468	mCV25111141	ABI	CRAMUS_MOUSE	f	SNP	G	A	C
ss147559885	ENSMUSSNP7225847	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss321354266	CHEV_4_135701779	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32716207					SNP	G	A	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135873175 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15098	CpG island 15098	710 bp distal
Cpgi15099	CpG island 15099	1669 bp proximal
Gm57159	predicted gene, 57159	821 bp upstream
Gm68296	predicted gene, 68296	1323 bp upstream
Id3	inhibitor of DNA binding 3	472 bp downstream
Rr377254	regulatory region 377254	315 bp upstream
Rr398607	regulatory region 398607	1947 bp downstream
Rr602286	regulatory region 602286	331 bp distal
Rr602287	regulatory region 602287	833 bp proximal
Rr602288	regulatory region 602288	1334 bp proximal
Tssr39668	transcription start site region 39668	1060 bp downstream
Tssr39669	transcription start site region 39669	1357 bp upstream